Complementary classification approaches for protein sequences
نویسندگان
چکیده
منابع مشابه
GENERATING FUZZY RULES FOR PROTEIN CLASSIFICATION
This paper considers the generation of some interpretable fuzzy rules for assigning an amino acid sequence into the appropriate protein superfamily. Since the main objective of this classifier is the interpretability of rules, we have used the distribution of amino acids in the sequences of proteins as features. These features are the occurrence probabilities of six exchange groups in the seque...
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Determining the functional role(s) of enzymes is very important to build the metabolic blueprint of an organism and to identify the potential roles enzymes may play in metabolic and disease pathways. With exponential growth in gene and protein sequence data, it is not feasible to experimentally characterize the function(s) of all enzymes. Alternatively, computational methods can be used to anno...
متن کاملDocument Classification of Protein Sequences
1 The need for accurate, automated protein classification methods continues to increase as advances in biotechnology uncovers new proteins at a fast rate. G-protein coupled receptors (GPCRs) are a particularly difficult superfamily of proteins to classify due to the extreme diversity among its members; yet, they are an important subject in pharmacological research being the target of approximat...
متن کاملClassification of Protein Sequences Using Markov Models Classification of Protein Sequences Using Markov Models
Preface This study was completed as a master thesis at the institute of Informatics and Mathematical Modeling (IMM)-Technical University of Denmark (DTU). The project has been completed in the period between September 1 st 2003 and Marts 1 st 2004 (and is rated as 35 points). Associate Professor Paul Fischer also IMM, DTU has been supervisor for the project. The report deals with a general clas...
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Signal Processing Research Group Graduate School of Science and Engineering
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ژورنال
عنوان ژورنال: "Protein Engineering, Design and Selection"
سال: 1996
ISSN: 1741-0126,1741-0134
DOI: 10.1093/protein/9.5.381